[Home]
[Full version]
Ripening secrets of the vine revealed
Nov 21 ,General Science
Whether you prefer a Cabernet Sauvignon or a Pinot Noir grape variety, two new research articles published in the online open access journal, BMC Genomics, offer a host of new genetic information on fruit ripening for this economically important fruit crop.
The grapevine's gene expression analysis reveals two distinct molecular and functional phases that correspond with the green and red grape stages. And researchers have reported the first biochemical evidence that reactive oxygen species accumulate during the colour transition.
Stefania Pilati and fellow researchers from the IASMA Research Center, San Michele all'Adige, Italy, investigated ripening Pinot Noir grapes (Vitis vinifera L.) to identify fruit ripening genes and investigate seasonal influences. They found a core set of more than 1,400 ripening-specific genes that fluctuated similarly across three growing seasons and a smaller gene group strongly influenced by climatic conditions.
During the green berry (pre-véraison) phase, numerous genes involved in hormonal signalling and transcriptional regulation were modulated, suggesting large-scale cellular metabolism reprogramming. Auxin, ethylene and light played pivotal roles. During the following ripening (post-véraison) phase, genes for cell-wall organization and biogenesis, carbohydrate and secondary metabolisms, and stress response came into play, whereas photosynthesis was strongly repressed.
These transcriptional events tally with the processes of berry softening and accumulation of sugar, colour and aroma compounds, which ultimately determine berry and wine quality. At véraison, the intervening point when grapes slow down their growth and change colour, this study highlighted an oxidative burst involving hydrogen peroxide (H2O2), and an extensive modulation of the enzymatic anti-oxidative network.
Meanwhile, Laurent G. Deluc and colleagues from the University of Nevada, Reno and the Boston University School of Medicine, USA, took a closer look at the V. vinifera Cabernet Sauvignon variety, surveying seven different stages of grape berry development. The team mapped pronounced differences throughout development in messenger-RNA (mRNA) expression for genes that play key functional roles in a host of processes. These included organic and amino acid metabolism, photosynthesis, circadian cycles and pathogen resistance.
In particular, the researchers recorded changes associated with transcription factor expression patterns, abscisic acid (ABA) biosynthesis, and calcium signalling genes that identified candidate factors likely to participate in véraison, or aroma compound production, and in pathway regulation and sequestration of flavonoid compounds. Some mRNAs were observed to decrease or increase specifically throughout ripening and sugar metabolism gene expression pattern analysis revealed an alternative and previously uncharacterised pathway for glucose and triose phosphate production invoked from véraison to mature berries.
Despite the grapevine's importance, genetic cues underlying the biochemical and physical changes during berry and flavour development have lain undiscovered - until now. "The large number of regulatory genes we have identified represents a powerful new resource for dissecting the mechanisms of fruit ripening control in non-climacteric plants", Pilati and co-workers say. Meanwhile, the second team say they have identified "a set of previously unknown genes potentially involved in critical steps associated with fruit development that can now be subjected to functional testing".
Source: BioMed Central
Related stories:
Unlocking the secrets of ripening for better tasting fruits and veggies
Researchers worldwide are learning to control the key chemical processes involved in ripening, a development that will lead to longer lasting, better tasting tomatoes, apples, and other fruits and vegetables, according to an article scheduled for the Oct. 29 issue of
Chemical & Engineering News, ACS' weekly newsmagazine.
Genes involved in coffee quality have been identified
To maintain their incomes, growers are increasingly banking on producing quality coffee. However, improving coffee beverage quality means knowing more about the biological processes - flowering, fruit ripening, etc - that determine end product characteristics.
New study shows how broccoli helps reduce cancer risk
A scientific study published here Wednesday sheds light on why men who eat a lot of broccoli are less likely to develop prostate cancer.
The 21st century tomato
When tomatoes ripen in our gardens, we watch them turn gradually from hard, green globules to brightly colored, aromatic, and tasty fruits. This familiar and seemingly commonplace transformation masks a seething mass of components interacting in a well-regulated albeit highly complex manner. For generations, agriculturalists and scientists have bred tomatoes for size, shape, texture, flavor, shelf-life, and nutrient composition, more or less, one trait at a time. With the advent of molecular biology, mutagenesis and genetic transformation could produce tomatoes that were more easily harvested or transported or turned into tomato paste. Frequently, however, optimizing for one trait led to deterioration in another. For example, improving flavor could have a negative effect on yield.
Ronin an alternate control for embryonic stem cells
Like the masterless samurai for whom it is named, the protein Ronin chooses an independent path, maintaining embryonic stem cells in their undifferentiated state and playing essential roles in genesis of embryos and their development, said Baylor College of Medicine researchers who reported on this novel cellular regulator in the current issue of the journal
Cell.
Genomics of large marine animals showcased in the biological bulletin
Though the slow moving purple sea urchin may look oblivious, lacking a head, eyes and ears, this prickly creature has an impressive suite of sensory receptors to detect outside signals. And don't overlook this animal's self-defense abilities: it has much more ammunition to activate its innate immune system than humans have. The starlet sea anemone lives in coastal areas that face increasing pollution, and it is better equipped than many land, ocean, and freshwater animals to tolerate environmental stress.
Automated microfluidic device reduces time to screen small organisms for genetic studies
Genetic studies on small organisms such as worms and flies can now be done more quickly using a new microfluidic device developed by engineers at the Georgia Institute of Technology.
Lab identifies new role for factor critical to transcription
The Stowers Institute's Shilatifard Lab has identified a new role for the elongation factor ELL in gene transcription by RNA polymerase II (Pol II) — the enzyme that synthesizes messenger RNA to carry genetic information from DNA to the protein-synthesizing machinery of the cell.
[Home]
[Full version]